Software

DEKupl Method: Exhaustive capture of biological variation in RNA-seq data through k-mer decomposition.

Audoux J., Philippe N., Chikhi R., Salson M., Gallopin M., Gabriel M., Le Coz J., Drouineau E., Commes T., Gautheret D.
Github

R Package xLLiM: High Dimensional Locally-Linear Mapping.

Devijver E.,Gallopin M., Perthame E.
R CRAN

R Package shock: Slope Heuristic blOCK-diagonal covariance selection.

Devijver E.,Gallopin M.
R CRAN

R Package ICAL: Integrated Completed Annotated Likelihood criterion.

Gallopin M., Celeux G., Jaffrézic F., Rau A.
Github

Bioconductor Package HTSFilter: Filter replicated high-throughput transcriptome sequencing data.

Rau A., Gallopin M., Celeux G., Jaffrézic F.
R Bioconductor